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List of publications riet De Rycke

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List of publications riet De Rycke



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LIST OF PUBLICATIONS Riet De Rycke

1. De Clercq, A., Vandewiele, M., De Rycke, R., Van Damme, J., Van Montagu, M., Krebbers, E., and Vandekerckhove, J.



Expression and processing of 2S albumins in transgenic plants

Plant Physiol., 1990
2. Dekeyser, R., Claes, B., De Rycke, R., Habets, M., Van Montagu, M., and Caplan, A.

Transient gene expression in intact and organized rice tissue

Plant Cell, 1990
3. Bowler, C., Slooten, L., Vandenbranden, S., De Rycke, R., Botterman, J., Sybesma, C., Van Montagu, M., and Inzé, D.

Manganese superoxide dismutase can confer protection against oxidative stress in transgenic plants

EMBO J., 1991
4. Denecke, J., De Rycke, R., and Botterman, J.

Plant and mammalian sorting signals for protein retention in the endoplasmic reticulum contain a conserved epitope

EMBO J., 1992
5. D'Hondt, K., Van Damme, J., Van Den Bossche, C., Leejeerajumnean, S., De Rycke, R., Derksen, J., Vandekerckhove, J., and Krebbers, E. Studies of the role of the propeptides of the Arabidopsis thaliana 2S albumin

Plant Physiol.,1993
6. Tiré, C., De Rycke, R., De Loose, M., Inzé, D., Van Montagu, M., and Engler, G.

Extensin gene expression is induced by mechanical stimuli leading to local cell wall strengthening in Nicotiana plumbaginifolia Planta, 1994
7. De Wilde, C., De Neve, M., De Rycke, R., Bruyns, A.M., De Jaeger, G., Van Montagu, M., Depicker, A., and Engler, G.

Intact antigenbinding MAK33 antibody and Fab fragment accumulate in intercellular spaces of Arabidopsis thaliana

Plant Sci., 1996
8. Renckens, S., De Greve, H., Beltrân-Herrera, J., Thia Toong, L., Deboeck, F., De Rycke, R., Van Montagu, M., and Hernalsteens, J.P. Insertion mutagenesis and study of transposable elements using a new unstable virescent seedling allele for isolation of haploid petunia lines

Plant J., 1996
9. Kapila, J., De Rycke, R., Van Montagu, M., and Angenon, G.

An Agrobacteriummediated transient gene expression system for intact leaves

Plant Sci., 1997
10. De Wilde, C., De Rycke, R., Beeckman, T., De Neve, M., Van Montagu, M., Engler, G., and Depicker, A.

Accumulation pattern of IgG antibodies and Fab fragments in transgenic Arabidopsis thaliana plants

Plant Cell Physiol., 1998

11. D'Haeze, W., Gao, M., De Rycke, R., Van Montagu, M., Engler, G., and Holsters, M.



Roles for azorhizobial Nod factors and surface polysaccharides in intercellular invasion and nodule penetration, respectively

Mol. PlantMicrobe Interact., 1998
12. Rohde, A., De Rycke, R., Beeckman, T., Engler, G., Van Montagu, M., and Boerjan, W.

ABI3 affects plastid differentiation in darkgrown Arabidopsis seedlings

Plant Cell, 2000
13. Chen, C., Meyermans, H., Burggraeve, B., De Rycke, R.M., Inque, K., De Vleesschauwer, V., Steenackers, M., Van Montagu, M.C., Engler, G.J., and Boerjan, W.

Cellspecific and conditional expression of caffeoylCoA Omethyltransferase in poplar

Plant Physiol., 2000
14. Goossens, A., Quintero, C., Dillen, W., De Rycke, R., Valor, J.F., De Clercq, J., Van Montagu, M., Cardona, C., and Angenon, G.

Analysis of bruchid resistance in the wild common bean accession G02771: no evidence for insecticidal activity of arcelin 5

J. Exp. Bot., 2000
15. Beeckman, T., De Rycke, R., Viane, R., and Inzé, D.

Histological study of seed coat development in Arabidopsis thaliana

J. Plant Res., 2000
16. Vandermijnsbrugge, K., Beeckman, H., De Rycke, R., Van Montagu, M., Engler, G., and Boerjan, W.

Phenylcoumaran benzylic ether reductase, a prominent poplar xylem protein, is strongly associated with phenylpropanoid biosynthesis in lignifying cells

Planta, 2000
17. Kushnir, S., Babiychuk, E., Storozhenko, S., Davey, M.W., Papenbrock, J., De Rycke, R., Engler, G., Stephan, U.W., Lange, H., Kispal, G., Lill, R., and Van Montagu, M.

A mutation of the mitochondrial ABC transporter Sta1 leads to dwarfism and chlorosis in the Arabidopsis mutant starik.

Plant Cell 13, 2001
18. Gao, M., D'Haeze, W., De Rycke, R., Wolucka, B., and Holsters, M. Knockout of an azorhizobial dTDPlrhamnose synthase affects lipopolysaccharide and extracellular polysaccharide production and disables symbiosis with Sesbania rostrata

Mol. PlantMicrobe Interact., 2001
19. Gao, M., D'Haeze, W., De Rycke, R., and Holsters, M.

Dual control of the nodA operon of Azorhizobium caulinodans ORS571 by a nod box and a NifA54type promoter

Mol. Genet. Genomics, 2001

20. Van Gijsegem, F., Vasse, J., De Rycke, R., Castello, P., and Boucher, C. Genetic dissection of the Ralstonia solanacearum hrp gene cluster reveals that the HrpV and HrpX proteins are required for Hrp pilus assembly



Mol. Microbiol., 2002

21. Rohde, A., Prinsen, E., De Rycke, R., Engler, G., Van Montagu, M., and Boerjan, W.



Poplar ABI3 impinges on growth and differentiation of embryogenic leaves during but set in poplar

Plant Cell, 2002
22. Beeckman, T., Przemeck, G.K.H., Stamatiou, G., Lau, R., Terryn, N., De Rycke, R., Inzé, D., and Berleth, T.

Genetic complexity of CESA gene function in Arabidopsis embryogenesis

Plant Physiol., 2002


Publications since 2003 with IRC-PSB TEM-Core contribution:


  1. D'Haeze W, De Rycke R, Mathis R, Goormachtig S, Pagnotta S, Verplancke C, Capoen W, Holsters M
    Reactive oxygen species and ethylene play a positive role in lateral root base nodulation of a semiaquatic legume
    P NATL ACAD SCI USA, 2003




  1. Rohde A, Morreel K, Ralph J, Goeminne G, Hostyn V, De Rycke R, Kushnir S, Van Doorsselaere J, Joseleau J-P, Vuylsteke M, Van Driessche G, Van Beeumen J, Messens E, Boerjan W
    Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism
    PLANT CELL, 2004




  1. D'Haeze W, Glushka J, De Rycke R, Holsters M, Carlson RW
    Structural characterization of extracellular polysaccharides of Azorhizobium caulinodans and importance for nodule initiation on Sesbania rostrata
    MOL MICROBIOL, 2004




  1. De Smet I, Chaerle P, Vanneste S, De Rycke R, Inzé D, Beeckman T
    An easy and versatile embedding method for transverse sections
    J MICROSC-OXFORD, 2004



  1. Capoen W, Goormachtig S, De Rycke R, Schroeyers K, Holsters M
    SrSymRK, a plant receptor essential for symbiosome formation
    P NATL ACAD SCI USA, 2005



  1. Mathis R, Van Gijsegem F, De Rycke R, D'Haeze W, Van Maelsaeke E, Anthonio E, Van Montagu M, Holsters M, Vereecke D
    Lipopolysaccharides as a communication signal for progression of legume endosymbiosis
    P NATL ACAD SCI USA, 2005




  1. Vanstraelen M, Van Damme D, De Rycke R, Mylle E, Inzé D, Geelen D
    Cell cycle-dependent targeting of a kinesin at the plasma membrane demarcates the division site in plant cells
    Curr Biol, 2006




  1. Van de Velde W, Pérez Guerra JC, De Keyser A, De Rycke R, Rombauts S, Maunoury N, Mergaert P, Kondorosi E, Holsters M, Goormachtig S
    Aging in legume symbiosis. A molecular view on nodule senescence in Medicago truncatula
    Plant Physiol, 2006




  1. Vercammen D, Belenghi B, van de Cotte B, Beunens T, Gavigan JA, De Rycke R, Brackenier A, Inze D, Harris JL, Van Breusegem F
    Serpin1 of Arabidopsis thaliana is a Suicide Inhibitor for Metacaspase 9
    J Mol Biol, 2006




  1. Van Damme D, Coutuer S, De Rycke R, Bouget FY, Inzé D, Geelen D
    Somatic Cytokinesis and Pollen Maturation in Arabidopsis Depend on TPLATE, Which Has Domains Similar to Coat Proteins
    Plant Cell, 2006




  1. Goossens S, Janssens B, Vanpoucke G, De Rycke R, van Hengel J, Van Roy F
    Truncated isoform of mouse alphaT-catenin is testis-restricted in expression and function
    Faseb J, 2007




  1. Goossens S, Janssens B, Bonné S, De Rycke R, Braet F, van Hengel J, Van Roy F
    A unique and specific interaction between {alpha}T-catenin and plakophilin-2 in the area composita, the mixed-type junctional structure of cardiac intercalated discs
    J Cell Sci, 2007




  1. Fusaro AF, Bocca SN, Ramos RL, Barroco RM, Magioli C, Jorge VC, Coutinho TC, Rangel-Lima CM, De Rycke R, Inzé D, Engler G, Sachetto-Martins G
    AtGRP2, a cold-induced nucleo-cytoplasmic RNA-binding protein, has a role in flower and seed development
    Planta, 2007




  1. Den Herder J, Vanhee C, De Rycke R, Corich V, Holsters M, Goormachtig S
    Nod factor perception during infection thread growth fine-tunes nodulation
    Mol Plant Microbe Interact, 2007


  1. Leplé, JC., Dauwe, R., Morreel, K., Storme, V., Lapierre, C., Pollet, B., Naumann, A., Kang, KY., Kim, H., Ruel, K., Lefèbvre, A., Joseleau, JP., Grima-pettenati, J., De Rycke, R., Andersson-Gunnerås, S., Erban, A., Fehrle, I., Petit-Conil, M., Kopka, J., Polle, A., Messens, E., Sundberg, B., Mansfield, SD., Ralph, J., Pilate, G. and Boerjan, W. Downregulation of cinnamoyl-coenzyme a reductase in poplar: multiple-level phenotyping reveals effects on cell wall polymer metabolism and structure. Plant Cell, 2007




  1. Takahashi, N, Vanlaere, I, de Rycke, R, Cauwels, A, Joosten, LA, Lubberts, E, van den Berg, WB, Libert, C.
    IL-17 produced by Paneth cells drives TNF-induced shock
    J Exp Med, 2008




  1. Den Herder G, De Keyser A, De Rycke R, Rombauts S, Van de Velde W, Clemente M R , Verplancke R, Mergaert P, Kondorosi E, Holsters M and Sofie Goormachtig Seven in Absentia Proteins Affect Plant Growth and Nodulation in Medicago truncatula Plant Physiology, 2008




  1. Sklyarova, T, Bonne, S, D'hooge, P, Denecker, G, Goossens, S, de Rycke, R, Borgonie, G, Bösl, M, Van Roy, F, van Hengel, J.
    Plakophilin-3-deficient mice develop hair coat abnormalities and are prone to cutaneous inflammation
    J Invest Dermatol, 2008




  1. Tanaka, H., Kitakura, S., De Rycke, R., De Groodt, R., and Friml, J. Fluorescence Imaging-Based Screen Identifies ARF GEF Component of Early Endosomal Trafficking. Current biology, 2009




  1. Capoen, W., Den Herder, J., Sun, J., Verplancke,C., De Keyser, A., De Rycke, R., Goormachtig,S., Oldroyd, G., and Holsters, M. Calcium spiking patterns and the role of the calcium/calmodulin-dependent kinase CCaMK in lateral root base nodulation of Sesbania rostrata The Plant Cell 10, 2009




  1. De Koker, S, De Geest, BG, Singh, SK, De Rycke, R, Naessens, T, Van Kooyk, Y, Demeester, J, De Smedt, SC, Grooten, J.
    Polyelectrolyte microcapsules as antigen delivery vehicles to dendritic cells: uptake, processing, and cross-presentation of encapsulated antigens
    Angew Chem Int Ed Engl, 2009

22. Skirycz A, De Bodt S, Obata T, De Clercq I, Claeys H, De Rycke R,

Andriankaja M, Van Aken O, Van Breusegem F, Fernie A R, and Inzé D

Developmental stage specificity and the role of mitochondrial metabolism

in the response of Arabidopsis leaves to prolonged mild osmotic

stress1[w]

Plant Physiology, 2010


23. Perez Guerra JC, Coussens G, De Keyser A, De Rycke R, De Bodt S , Van De Velde W, Goormachtig S, and Holsters M.

Comparison of developmental and stress-induced nodule senescence in Medicago truncatula


Plant Physiology, 2010
24. Wirawan E, Vande Walle1 L, Kristof K, Cornelis S, Claerhout S,

Vanoverberghe I, Roelandt R, De Rycke R, Verspurten J, Declercq W,

Agostinis P, Vanden Berghe T, S Lippens and Vandenabeele P.

Caspase-mediated cleavage of Beclin-1 inactivates

Beclin-1-induced autophagy and enhances apoptosis by promoting the

release of proapoptotic factors from mitochondria

Cell Death and Disease, 2010
25. Feraru E, Paciorek T, Feraru M I, De Rycke R, De

Groodt R, Kleine-Vehn J, and Friml J



The AP-3 adaptor complex mediates the biogenesis and function of the

lytic vacuoles in Arabidopsis

The Plant Cell, 2010
26. Katrien Curvers, Hamed Seifi, Gre´gory Mouille, Riet de Rycke, Bob

Asselbergh, Annelies Van Hecke, Dieter Vanderschaeghe, Herman Höfte, Nico

Callewaert, Frank Van Breusegem, and Monica Höfte

Abscisic acid deficiency causes changes in cuticle permeability and

pectin composition that influence tomato resistance to Botrytis cinerea

Plant Physiology, Vol. 154: 847-860 , 2010
27. Ruben Vanholme, John Ralph, Takuya Akiyama, Fachuang Lu, Jorge Rencoret

Pazo, Hoon Kim, Jørgen Holst Christensen, Brecht Van Reusel, Véronique

Storme, Riet De Rycke, Antje Rohde, Kris Morreel, and Wout Boerjan

Engineering traditional monolignols out of lignin by concomitant F5H1-up- and COMT-down-regulation in Arabidopsis

Plant Journal, 2010
28. Guerfal, M, Ryckaert, S, Jacobs, PP, Ameloot, P, Van Craenenbroeck, K,

Derycke, R, Callewaert, N.


The HAC1 gene from Pichia pastoris: characterization and effect of its

overexpression on the production of secreted, surface displayed and

membrane proteins
Microb Cell Fact, 2010.
29. Mc Guire, C, Volckaert, T, Wolke, U, Sze, M, De Rycke, R, Waisman, A,

Prinz, M, Beyaert, R, Pasparakis, M, van Loo, G.


Oligodendrocyte-specific FADD deletion protects mice from autoimmune-

mediated demyelination
J Immunol 185, 2010.
30. Nele Festjens, Erica Houthuys, Pieter Bogaert, Evelyn Plets, Anjana

Batni, Bob Asselbergh, Eef Parthoens, Riet De Rycke, Monique Willart,

Peggy Jacques, Dirk Elewaut, Peter Brouckaert, Bart Lambrecht, Kris

Huygen, Nico Callewaert



M. bovis BCG SapM mutant as improved M. tb vaccine

EMBO Molecular Medicine, 2011

31. Remijsen, Q, Vanden Berghe, T, Wirawan, E, Asselbergh, B, Parthoens, E,

De Rycke, R, Noppen, S, Delforge, M, Willems, J, Vandenabeele, P.

Neutrophil extracellular trap cell death requires both autophagy and

superoxide generation
Cell Res, 2011

32. Elena Babiychuk , Klaas Vandepoele , Josef Wissing , Miguel Garcia-Diaz , Riet De Rycke , Hana Akbari , Jérôme Joubès , Tom Beeckman , Lothar Jänsch , Margrit Frentzen , Marc Van Montagu , Sergei Kushnir



Plastid gene expression and plant development require a plastidic protein of the mitochondrial transcription termination factor family

PNAS, 2011
33. Katrijn Vannerum, Marie JJ Huysman, Riet De Rycke, Marnik Vuylsteke,
Frederik Leliaert, Jacob Pollier, Ursula Lütz-Meindl, Jeroen Gillard,
Lieven De Veylder, Alain Goossens, Dirk Inzé and Wim Vyverman

Transcriptional analysis of cell growth and morphogenesis in the
unicellular green alga Micrasterias (Streptophyta), with emphasis on the
role of expansin


BMC Plant Biology, 2011
34. Dierendonck, M., De Koker, S., De Rycke, R., Bogaert, P., Grooten, J.,

Vervaet, C., Remon, J.P. & De Geest, B.G.



Single-step formation of degradable intracellular biomolecule

microreactors.

ACS Nano, 2011
35. Katrijn Vannerum, Riet De Rycke, Jacob Pollier, Alain Goossens, Dirk

Inzé, and Wim Vyverman



Characterization of a RABE GTPase expressed during morphogenesis of the

unicellular green alga Micrasterias denticulata (Zygnemophyceae,

Streptophyta)

Journal of Phycology, 2011
36. Isolde Francis, Annick De Keyser, Philippe De Backer, Carmen Simón-

Mateo,Jutta Kalkus, Ine Pertry, Wilson Ardiles-Diaz, Riet De Rycke,

Olivier M. Vandeputte, Mondher El Jaziri, Marcelle Holsters, and Danny

Vereecke


Deciphering pFiD188, the linear virulence plasmid of Rhodococcus

fascians strain D188

Environmental Microbiology and Environmental Microbiology, 2012
37. Cleide Bomfeti, Paulo Avelar Ferreira, Teotônio Soares de Carvalho, Riet

De Rycke, Fatima de Souza Moreira, Sofie Goormachtig, Marcelle Holsters



Nodule development on the tropical legume Sesbania virgata under flooded

and nonflooded conditions
Plant Biology, 2012
38. Jifen Li, Steven Goossens, Jolanda van Hengel, Erhe Gao, Lan Cheng,
Koen Tyberghein, Xiying Shang, Riet De Rycke, Frans van Roy, and Glenn

Radice


Loss of αT-catenin alters the hybrid adhering junctions in the heart
and leads to dilated cardiomyopathy and ventricular arrhythmia following


acute ischemia

JCS, 2012

39. Leentje Jansen, Ianto Roberts, Riet De Rycke and Tom Beeckman



Phloem-associated auxin response maxima determine radial positioning of

lateral roots in maize

Philos. Trans. R. Soc. B-Biol. Sci., 2012

40. M Schotsaert, T Ysenbaert, K Neyt, L I Ibañez, P Bogaert, B Schepens, B N Lambrecht, W Fiers and X Saelens Natural and long-lasting cellular immune responses against influenza in the M2e-immune host Mucosal Immunology ,  2012 TEM images in supplementary data

41. Roosmarijn E. Vandenbroucke, Eline Dejonckheere, Philippe Van Lint,

Delphine Demeestere, Elien Van Wonterghem, Ineke Vanlaere, Leen Puimège,

Filip Van Hauwermeiren, Riet DeRycke, Conor Mc Guire, Cristina Campestre,

Carlos López-Otin5, Patrick Matthys, Georges Leclercq, and Claude Libert



MMP8-dependent ECM cleavage at the blood-CSF barrier contributes to

lethality during systemic inflammatory diseases

The Journal of Neuroscience, 2012

42. Elena Feraru, Mugurel I. Feraru, Tomasz Paciorek, Riet De Rycke, Hirokazu

Tanaka and Jiří Friml

BEX5/RabA1b Regulates trans-Golgi Network-to-Plasma Membrane Protein

Trafficking in Arabidopsis



The Plant Cell, 2012
43. Esther Hoste, Geertrui Denecker, Barbara Gilbert, Filip Van Nieuwerburgh,

Leslie van der Fits, Bob Asselbergh, Riet de Rycke, Jean-Pierre Hachem,

Dieter Deforce, Errol Prens, Peter Vandenabeele and Wim Declercq

Caspase-14 deficient mice are more prone to development of parakeratosis

Journal of Investigative Dermatology, 2012
44. Matyáš Fendrych, Lukáš Synek, Tamara Pečenková, Edita Janková-Drdová,

Juraj Sekereš, Riet de Rycke, Moritz K Nowack, Viktor Žárský



Visualization of the Exocyst Complex Dynamics at the Plasma Membrane of

Arabidopsis thaliana

Molecular Biology of the Cell, 2012
45. Sandy Vanderauwera, Korneel Vandenbroucke, Annelies Inzé, Brigitte van

de Cotte, Per Mühlenbock, Riet De Rycke, Naïra Naouar, Tim Van Gaever and

Frank Van Breusegem

AtWRKY15 perturbation abolishes mitochondrial retrograde signaling that

steers osmotic stress tolerance in Arabidopsis

PNAS, 2012
46. Kristiina Himanen, Tommaso Matteo Boccardi, Riet De Rycke, Ojola Patrick

Odeny and Mieke Van Lijsebettens



Is HUB1 a hub for plant fitness?

Plant Signaling & Behavior, 2012

47. Tomasz Nodzynski, Tomasz Nodzyński, Mugurel I. Feraru, Sibylle Hirsch,

Riet De Rycke, Claudiu Niculaes, Wout Boerjan, Jelle Van Leene, Geert De

Jaeger, Steffen Vanneste and Jiří Friml



Retromer subunits VPS35A and VPS29 mediate prevacuolar compartment (PVC)

function in Arabidopsis

Molecular Plant, 2013
48. Roosmarijn E. Vandenbroucke, Eline Dejonckheere, Filip Van

Hauwermeiren, Sofie Lodens, Riet De Rycke, Elien Van Wonterghem, An Staes,

Kris Gevaert, Carlos Lopez-Otin, and Claude Libert.

Matrix metalloproteinase 13 modulates intestinal epithelial barrier integrity in inflammatory diseases by activating TNF

EMBO Molecular Medicine, 2013
49. Stéphanie Blockhuys, Bart Van Rompaye, Riet De Rycke, Kathleen Lambein,

Marc Bracke, Carlos De Wagter, Olivier De Wever.



Radiation-induced myosin IIA-dependent collagen type I matrix

reorganization affects breast cancer cell death

Radiotherapy and Oncology, 2013
50. Hirokazu Tanaka, Saeko Kitakura, Hana Rakusová, Mugurel Feraru, Riet

De Rycke, Stephanie Robert, Tatsuo Kakimoto, Jiří Friml



Cell polarity and patterning by PIN trafficking through early endosomal

compartments in Arabidopsis

PLOS Genetics, 2013
51. B. De Samber, K. A. C. De Schamphelaere, C. R. Janssen, B. Vekemans,

R. De Rycke, G. Martinez-Criado, R. Tucoulou, P. Cloetens, L. Vincze



Hard X-ray nanoprobe investigations of the subtissue metal

distributions within Daphnia magna

Anal Bioanal Chem, 2013
52. Thomas De Meyer, Dominique Eeckhout, Riet De Rycke, Sylvie De Buck, Serge

Muyldermans and Ann Depicker



Generation of VHH antibodies against the Arabidopsis thaliana seed

storage proteins

Plant Molecular Biology, 2013
53. Mouna Guerfal, Katrien Claes, Oskar Knittelfelder, Riet De Rycke, Sepp D

Kohlwein and Nico Callewaert



Enhanced membrane protein expression by engineering increased

Intracellular Membrane production

Microbial Cell Factories, 2013
54. Zhang Zhiyue, Maji Samarendra, Antunes André, De Rycke Riet, Zhang Qilu,

Hoogenboom Richard, De Geest Bruno



Salt Plays a Pivotal Role in the Temperature-Responsive Aggregation and

Layer-by-Layer Assembly of Polymer-Decorated Gold Nanoparticles

Chemistry of Materials, 2013
55. Marijke Dierendonck, Stefaan De Koker, Riet De Rycke, Bruno De Geest

Just spray it – Next generation of electrostatic assembly

Soft Matter, 2013

56. Petra Nováková, SibylleHirsch, Elena Feraru, Ricardo Tejos, Tom Viaene,

Riet De Rycke, Ringo van Wijk, Mugurel Feraru, Peter Grones, Ingo

Heilmann, Teun Munnik, Marc C.E. Van Montagu, Jiří Friml



SAC domain phosphoinositide phosphatases at tonoplast mediate vacuolar

function in Arabidopsis

PNAS, 2014
57. Fabiola Osorio, Simon J Tavernier, Eik Hoffmann, Yvan Saeys, Liesbet

Martens, Jessica Vetters, Iris Delrue, Riet De Rycke, Eef Parthoens,

Philippe Pouliot, Takao Iwawaki, Sophie Janssens & Bart N Lambrecht
The unfolded-protein-response sensor IRE-1α regulates the function of

CD8alpha+ dendritic cells
Nature Immunology, 2014
58. Tongda Xu, Ning Dai, Jisheng Chen, Shingo Nagawa, Min Cao, Hongjiang Li,

Zimin Zhou, Xu Chen, Riet De Rycke, Wuyi Wang, , Alan M. Jones, Jiri

Friml, Sara E. Patterson, Anthony B. Bleecker , and Zhenbiao Yang

Cell surface ABP1-TMK auxin sensing complex activates ROP GTPase signaling

Science, 2014
59. Bartel Vanholme, Ruben Vanholme, Halbay Turumtay, Geert Goeminne, Igor

Cesarino, Florence Goubet, Kris Morreel, Jorge Rencoret, Vincent Bulone,

Cortwa Hooijmaijers, Riet De Rycke, Godelieve Gheysen, John Ralph, Marc

De Block, Frank Meulewaeter, Wout Boerjan



Accumulation of GlcNAc oligomers in the plant cell wall affects plant

architecture in a dose-dependent and conditional manner

Plant Physiology, 2014
60. Marijke Dierendonck, Kaat Fierens, Riet De Rycke, Lien Lybaert,

Samarendran Maji, Zhiyue Zhang, Qilu Zhang, Richard Hoogenboom, Bart N.

Lambrecht, Johan Grooten, Jean Paul Remon, Stefaan De Koker, and Bruno G.

De Geest


Nanoporous Hydrogen Bonded Polymeric Microparticles : Facile and Economic

Production of Cross Presentation Promoting Vaccine Carriers

Journal of Advanced Functional Materials, 2014
61. Satoshi Naramoto, Marisa S. Otegui, Natsumaro Kutsuna, Riet de Rycke,

Tomoko Dainobu, Michael Karampelias, Masaru Fujimoto, Elena Feraru,

Daisuke Miki, Hiroo Fukuda, Akihiko Nakano and Jiří Friml

Insights into the localization and function of the membrane trafficking

regulator GNOM ARF-GEF at the Golgi apparatus in Arabidopsis

The Plant Cell, 2014
62. Vandewynckel Yves-Paul, De Rycke Riet, Libbrecht Louis, Van Vlierberghe

Hans


Intestinal metaplasia in an orthotopic mouse model for hepatocellular

carcinoma

Liver International, 2014
63. Charles Hachez, Timothée Laloux, Hagen Reinhardt, Riet De Rycke, Dirk

Inzé, Michael R. Blatt, Eugenia Russinova, François Chaumont



Arabidopsis SNAREs SYP61 and SYP121 coordinate the trafficking of plasma

membrane aquaporin PIP2;7 to regulate the cell membrane water

permeability

The Plant Cell, 2014
64. Marijke Dierendonck, Kaat Fierens, Riet De Rycke, Bart N. Lambrecht,

Johan Grooten, Jean Paul Remon, Bruno G. De Geest, Stefaan De Koker



Nanoporous polyelectrolyte vaccine microcarriers – in vitro and in vivo

evaluation

Journal of Controlled Release, 2014
65. Claudiu Niculaes, Kris Morreel, Hoon Kim, Fachuang Lu, Lauren McKee, Bart

Ivens, Jurgen Haustraete, Bartel Vanholme, Riet De Rycke, Magnus

Hertzberg, Jorg Fromm, Vincent Bulone, Andrea Polle, John Ralph and Wout

Boerjan


PhenylCoumaran Benzylic Ether Reductase (PCBER) Prevents Accumulation of

Compounds Formed under Oxidative Conditions in Poplar Xylem

The Plant Cell, 2014

66. Lien Lybaert, Elly De Vlieghere, Riet De Rycke, Nane Vanparijs, Olivier

De Wever,Stefaan De Koker, Aaron Esser-Kahn, Bruno G. De Geest

Bio-hybrid tumor cell-templated capsules: a generic formulation strategy

for tumor associated antigens in view of anti-cancer immune-therapy

Journal of Advanced Functional Materials, 2014
67. Yves-Paul Vandewynckel, Debby Laukens, Eliene Bogaerts, Annelies

Paridaens, Anja Van den Bussche, Xavier Verhelst, Christophe Van

Steenkiste, Benedicte Descamps, Chris Vanhove, Louis Libbrecht, Riet De

Rycke, Bart Lambrecht, Anja Geerts, Isabelle Colle, Sophie Janssens, Hans

Van Vlierberghe


Modulation of the unfolded protein response impedes tumor cell adaptation

to proteotoxic stress: a PERK for hepatocellular carcinoma therapy







Hepatology International, 2015
68. Van Hauwermeiren F , Vandenbroucke RE , Van Wonterghem E, Gryne L, De

Rycke R, De Geest N, Kollias G, Hassan B, Libert C



TNFR1-induced lethal inflammation is mediated by goblet and Paneth cell

dysfunction

Mucosal Immunology, 2015
69. Philippe De Groote, Mathias Fransen, Hong Thi Tran, Corinne Rösselet,

Bram De Craene, Giel Tanghe, Kirsten Leurs, Barbara Gilbert, Riet De

Rycke, Chris Guerin, Pamela Holland, Peter Vandenabeele, Kris Vleminckx,

Saskia Lippens, Wim Declercq.



A novel RIPK4-IRF6 connection is required to prevent epithelial fusions

characteristic for popliteal pterygium syndromes

Cell Death and Differentiation, 2015
70. Thomas De Meyer, Bram Laukens, Jonah Nolf, Els Van Lerberge, Riet De

Rycke, Ans Debeuckelaer, Sylvie De Buck, Nico Callewaert and Ann Depicker



Comparison of VHH-Fc antibody production in Arabidopsis thaliana,

Nicotiana benthamiana and Pichia pastoris

Plant Biotechnology Journal, 2015
71. Peter Grones, Xu Chen, Sibu Simon, Walter A. Kaufmann, Riet De Rycke,

Tomasz Nodzynski, Eva Zažímalová and Jiří Friml



Auxin binding pocket of ABP1 is crucial for its gain-of-function cellular

and developmental roles

Journal of Experimental Botany, 2015

72. Liesbeth Vercruyssen, Vanesa B. Tognetti, Nathalie Gonzalez, Judith Van

Dingenen, Liesbeth De Milde, Agnieszka Bielach, Riet De Rycke, Frank Van

Breusegem, and Dirk Inzé



GROWTH REGULATING FACTOR5 Stimulates Arabidopsis Chloroplast Division,

Photosynthesis, and Leaf Longevity

Plant Physiology, 2015
73. Niemiec MJ , De Samber B , Garrevoet J , Vergucht E , Vekemans B , De

Rycke R , Björn E, Sandblad L , Wellenreuther G , Falkenberg, G ,

Cloetens P , Vincze L & Urban CF

Trace element landscape of resting and activated human 2 neutrophils on

the sub-micrometer level

Metallomics, 2015
74. Simon Devos, Laurence Van Oudenhove, Stephan Stremersch, Wouter Van

Putte, Riet Derycke, Gonzalez Van Driessche, Jolien Vitse, Koen

Raemdonck and Bart Devreese

The effect of imipenem and diffusible signaling factors on the secretion

of outer membrane vesicles and associated Ax21 proteins in

Stenotrophomonas maltophilia

Frontiers in microbiology, 2015
75. Zhiyue Zhang, Katleen Van Steendam, Riet De Rycke, Samarendra Maji ,

Lieve Balcaen, Glenn Vanluchene, Frank Vanhaecke, Dieter Deforce, Richard

Hoogenboom, Bruno G. De Geest

Tailoring Cellular Uptake of Gold Nanoparticles via the Hydrophilic-to

Hydrophobic Ratio of their (co)polymer coating

Journal of Advanced Functional Materials, 2015
76. Kim Baert; Bruno G De Geest; Riet De Rycke; André  B da Fonseca Antunes;

Bert Devriendt; Eric Cox



β-glucan microparticles targeted to epithelial APN as oral antigen

delivery system

Journal of Controlled Release, 2015
77. Kasmi, Sabah; Louage, Benoit; Nuhn, Lutz; Van Driessche, Aleaxandra; Van

Deun, Jan; Karalic, Izet; Risseeuw, Martijn; Van Calenbergh, Serge;

Hoogenboom, Richard; De Rycke, Riet; De Wever, Olivier; Hennink, Wim; De

Geest, Bruno



Transiently responsive block copolymer micelles based on HPMA engineered

with hydrolysable ethylcarbonate side chains

Biomacromolecules , 2016
78. Hui Li, Kaat Fierens, Zhiyue Zhang, Nane Vanparijs, Martijn Schuijs,

Katleen Van Steendam, Natàlia Feiner Gracia, Riet De Rycke, Thomas De

Beer, Ans De Beuckelaer, Stefaan De Koker, Dieter Deforce, Lorenzo

Albertazzi, Johan Grooten, Bart N. Lambrecht,and Bruno G. De Geest



Spontaneous Protein Adsorption on Graphene Oxide Nanosheets Allows

Efficient Intracellular Vaccine Protein Delivery

ACS Applied materials & Interfaces, 2016
79. Gilles Brackman, Koen Breyne, Riet De Rycke, Arno Vermote, Filip Van

Nieuwerburgh, Evelyne Meyer, Serge Van Calenbergh & Tom Coenye



The Quorum Sensing Inhibitor Hamamelitannin Increases Antibiotic

Susceptibility of Staphylococcus aureus Biofilms by Affecting

Peptidoglycan Biosynthesis and eDNA Release

Scientific reports, 2016
80. Z. Zhang, B. Schepens, L. Nuhn, X. Saelens, M. Schotsaert, N.

Callewaert, R. De Rycke, Q. Zhang, S. Moins, S. Benali, L. Mespouille, R.

Hoogenboom and B. G. De Geest

Influenza-binding sialylated polymer coated gold nanoparticles prepared

via RAFT polymerization and reductive amination

ChemicalCommunications, 2016
81. Van Dingenen J., De Milde L., Vermeersch M., Maleux K., De Rycke R., De

Bruyne M., Storme V., Gonzalez N., Dhondt S. and Inzé D.



Chloroplasts are central players in sugar-induced leaf growth

Plant Physiology, 2016
82. Daan van der Zwaag , Nane Vanparijs , Sjors Wijnands , Riet De Rycke ,

Bruno de Geest



Super Resolution Imaging of Nanoparticles Cellular Uptake and Trafficking

ACS Applied Materials & Interfaces, 2016
83. Sriram Balusu, Elien Van Wonterghem, Riet De Rycke, Koen Raemdonck,

Stephan Stremersch, Kris Gevaert, Marjana Brkic, Delphine Demeestere,

Valerie Vanhooren, An Hendrix, Claude Libert and Roosmarijn E.

Vandenbroucke



Extracellular vesicles from the choroid plexus mediate blood-brain

communication during peripheral inflammation

EMBO Molecular Medicine, 2016
84. Betti C., Vanhoutte I., Coutuer S., De Rycke R., Mishev K., Vuylsteke M.,

Aesaert S., Rombaut D., Gallardo R., De Smet F., Xu J., Van Lijsebettens

M., Van Breusegem F., Inzé D., Rousseau F., Schymkowitz J. and Russinova

E

Sequence-specific protein aggregation generates defined protein



knockdowns in plants

Plant Physiology, 2016
85. Simon S., Skůpa P., Viaene T., Zwiewka M., Tejos R., Klíma P., Čarná M.,

Rolčík J., De Rycke R., Moreno I., Dobrev P.I., Orellana A., Zažímalová

E. and Friml J.

PIN6 auxin transporter at endoplasmic reticulum and plasma membrane

mediates auxin homeostasis and organogenesis in Arabidopsis

New Phytologist, 2016
86. Beata Orman-Ligeza, Boris Parizot, Riet De Rycke, Ana Fernandez, Ellie

Himschoot, Frank Van Breusegem, Malcolm Bennett, Claire Perilleux,

Xavier Draye and Tom Beeckman

RBOH-mediated ROS production facilitates lateral root emergence in

Arabidopsis

Development, 2016
87. Zhiyue Zhang, Samarendra Maji, André B. da Fonseca Antunes, Riet De

Rycke, Richard Hoogenboom, Bruno G. De Geest



Salt-Driven Deposition of Thermoresponsive Polymer-Coated Metal

Nanoparticles on Solid Substrates

Angew Chem Int Ed Engl, 2016
88. Tim Pieters; Steven Goossens; Lieven Haenebalcke; Vanessa Andries; Agata

Stryjewska; Riet De Rycke; Kelly Lemeire; Tino Hochepied; Danny

Huylebroeck; Geert Berx; Marc P Stemmler; Dagmar Wirth; Jody J Haigh;

Jolanda van Hengel; Frans van Roy



p120 Catenin-Mediated Stabilization of E-cadherin is Essential for

Primitive Endoderm Specification

PLOS Genetics, 2016
89. Ranhua Xiong, Freya Joris, Sayuan Liang, Riet De Rycke,⊥ Saskia

Lippens, Jo Demeester, Andre Skirtach, Koen Raemdonck, Uwe Himmelreich,

Stefaan C. De Smedt,

and Kevin Braeckmans



Cytosolic Delivery of Nanolabels Prevents Their Asymmetric

Inheritance and Enables Extended Quantitative in Vivo Cell Imaging

NANO letters, 2016
90. Björn De Samber, Maria J. Niemiec, Brecht Laforce, Jan Garrevoet, Eva Vergucht, Riet De Rycke, Peter Cloetens, Constantin F. Urban , Laszlo Vincze

Probing Intracellular Element Concentration Changes during Neutrophil Extracellular Trap Formation Using Synchrotron Radiation Based X-Ray Fluorescence

PLOSone, 2016

91. Tim Van Damme, Thatjana Gardeitchik, Miski Mohamed, Sergio GuerreroCastillo, Peter Freisinger, Brecht Guillemyn, Ariana Kariminejad, Daisy Dalloyaux, Sanne van Kraaij, Dirk J. Lefeber, Delfien Syx, Wouter Steyaert, Riet De Rycke, Alexander Hoischen, Erik-Jan Kamsteeg, Sunnie Y. Wong, Monique van Scherpenzeel, PaymanJamali, Ulrich Brandt, Leo N ijtmans, G. Christoph Korenke, Brian H.Y. Chung,Christopher C.Y. Mak, Ingrid Hausser, Uwe Kornak, Björn Fischer-Zirnsak, Tim M.Strom, Thomas Meitinger, Yasemin Alanay, Gulen E. Utine, Peter K.C. Leung, Siavash

Ghaderi-Sohi, Paul Coucke, Sofie Symoens, Anne De Paepe, Christian Thiel, Tobias B. Haack, Fransiska Malfait, Eva Morava, Bert Callewaert, Ron A. Wevers

Mutations in ATP6V1E1 or ATP6V1A Cause Autosomal Recessive Cutis Laxa

American Journal of Human Genetics, 2017
92. Alejandro Estrada-Cuzcano, Shaun Martin, Teodora Chamova, Matthis Synofzik, Dagmar Timmann, Tine Holemans, Albena Andreeva, Jennifer Reichbauer, Riet De Rycke, Dae-In Chan, Sarah van Veen, Jean Samuel, Ludger Schöls, Thorsten Pöppe, Danny Mollerup Sørensen, Bob Asselbergh, Christine Klein, Stephan Zuchner, Albena Jordanova1, Peter Vangheluwe, Ivailo Tournev, Rebecca Schüle

Loss-of-function mutations in the ATP13A2/PARK9 gene cause complicated hereditary spastic paraplegia (SPG78)

Brain, 2017



  1. Stijn J. M. Van Malderen, Björn De Samber, Brecht Laforce, Thibaut Van Acker, Charlotte Nys, Maarten De Rijcke, Riet de Rycke, Karel De Schamphelaere, Olga Borovinskaya, Laszlo Vincze, Frank Vanhaecke

Three-dimensional reconstruction of the tissue-specific multi-elemental distribution within Ceriodaphnia dubia via multimodal registration using laser ablation ICP-mass spectrometry and X-ray spectroscopic techniques

Analytical Chemistry, 2017
94.Philipp Arendt, Karel Miettinen, Jacob Pollier, Riet De Rycke, Nico Callewaert

And Alain Goossens



An endoplasmic reticulum-engineered yeast platform for overproduction of

triterpenoids

Metabolic engineering, 2017

  1. Lei Deng, Kenny Roose, Riet De Rycke, Evelien Van Hamme, Amanda Goncalves, Eef Parthoens, Laetitia Cicchelero, Niek Sanders, Walter Fiers, Xavier Saelens

Oral delivery of Escherichia coli persistently infected with M2e-displaying bacteriophages confers protection against influenza A virus

Journal of controlled release, 2017

  1. Jonas Blomme, Olivier Van Aken, Jelle Van Leene, Teddy Jégu, Riet De Rycke, Michiel De Bruyne, Twiggy Van Daele, Liesbeth De Milde, Mattias Vermeersch, Catherine Colas des Francs-Small, Geert De Jaeger, Moussa Benhamed, A. Harvey Millar, Dirk Inzé, and Nathalie Gonzalez

Arabidopsis SWIB5 Is a Mitochondrial DNA-Binding Protein Involved in Homologous Recombination

The Plant Cell, 2017


  1. Lybaert, Lien; Ryu, Nari; Nuhn, Lutz; De Rycke, Riet; De Wever, Olivier; Chon, Alfred; Esser-Kahn, Aaron; De Geest, Bruno
    Corresponding Author: Dr. Bruno De Geest

Cancer cell lysate entrapment in CaCO3 engineered with polymeric TRL-agonists – immunomodulating microparticles in view of personalized anti-tumor vaccination

Chemistry of Materials, 2017


  1. Moses Chemurot, Lina De Smet, Marleen Brunain, Riet De Rycke, Dirk de Graaf

Nosema neumanni n. sp. (Microsporidia, Nosematidae), a new microsporidian

parasite of honeybees, Apis mellifera in Uganda

European Journal of Protistology, 2017


  1. Tom Holvoet, Sarah Devriese, Karolien Castermans, Sandro Boland, Dirk Leysen, Yves-Paul Vandewynckel, Lindsey Devisscher, Lien Van den Bossche, Sophie Van Welden, Melissa Dullaers, Roosmarijn E. Vandenbroucke, Riet De Rycke, Karel Geboes, Arnaud Bourin, Olivier Defert, Pieter Hindryckx, Martine De Vos, Debby Laukens

Treatment of intestinal fibrosis in experimental inflammatory bowel disease by the pleiotropic actions of a local Rho kinase inhibitor

Gastroenterology, 2017


  1. Lien Lybaert, Keun Ah Ryu, Riet De Rycke, Alfred C. Chon, Olivier De Wever,

Karim Y. Vermaelen, Aaron Esser-Kahn, and Bruno G. De Geest

Polyelectrolyte-Enrobed Cancer Cells in View of Personalized Immune-

Therapy

Advanced science, 2017


  1. Simon J. Tavernier, Fabiola Osorio1, Lana Vandersarren, Jessica Vetters, Nele

Vanlangenakker,Gert Van Isterdael, Karl Vergote, Riet De Rycke, Eef Parthoens,

Lianne van de Laar, Takao Iwawaki, Juan R. Del Valle, Chih-Chi Andrew Hu, Bart N. Lambrecht and Sophie Janssens



Regulated IRE1-dependent mRNA decay sets the threshold for dendritic cell survival

Nature Cell Biology, 2017



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